Hi Everyone,
See below for a message from Victor regarding Prof. Ken Dill's theochem
visit next week. He will be giving a seminar next Wednesday
If you would like a meeting with Prof. Dill, or to grab lunch with him on
Thursday, please contact Victor.
Cheers,
Jennifer
---------- Forwarded message ---------
From: Victor Zhao <yzhao01(a)g.harvard.edu>
Date: Tue, Mar 14, 2017 at 6:48 PM
Subject: Prof. Ken Dill visiting Harvard on Thu Mar. 23
To: Jennifer Wei <jenniferwei(a)fas.harvard.edu>
Hi Jennifer,
Could you please pass along the following message to members of your group?
——
Hello everyone,
I am once again hosting a visitor for Theochem, a student-run lecture
series for theoretical chemistry. This time, Prof. Ken Dill of Stony Brook
University
<https://urldefense.proofpoint.com/v2/url?u=http-3A__dillgroup.stonybrook.edu_-23_home&d=CwMFaQ&c=WO-RGvefibhHBZq3fL85hQ&r=UPzYrSHLXjnX3tYn90C8Ljjzb-yfrb1UtMOxOFh-tKk&m=22llKBhBNS-LUVroPImK7NyFxcQCt-Y2QyLNtNVnKkQ&s=ZqIoV6qdnoR9GGvsIhdFbn74AioVD1sEkTb85Xhn6bg&e=>,
is visiting Boston March 21-23. On Thursday, March 23, he will be at
Harvard, and I am putting together a schedule for that day. Would you be
interested and available sometime that day for a meeting with him? Please
let me know.
At the moment, I am sending out scheduling emails, so the day's schedule is
still mostly open, excepting 3-3:45 PM.
Additionally, Prof. Dill will be speaking at MIT in Building 4, Rm 237 on
Wednesday, March 22 at 4:15 PM. Everyone is welcome to to attend. I've put
the abstract for his two-part talk below.
Finally, there is opportunity for lunch with Prof. Dill. The time for lunch
will be determined as the day’s schedule is filled, but I imagine it would
be sometime 12-1PM. Anyone interested can let me know.
Best,
Victor
---
Professor Ken Dill, Stony Brook University
Theochem Seminar
MIT 4-237, 4:15 PM, Wednesday March 22
Part I: Accelerating atomistic simulations of proteins by Bayesian
inference with unreliable information
Abstract: Molecular simulations give insights and quantitation to protein
folding, drug discovery and the binding of ligands, and biological
mechanistic actions in the cell. But, even with current sampling methods,
such as Replica Exchange, physical simulations are much too slow, and don't
scale well to larger proteins or larger actions. We have developed MELD,
which melds together vague external knowledge to accelerate physics-based
molecular simulations. I will describe proofs of principle in folding
proteins in the blind prediction event called CASP, and in computing
binding affinities of peptide ligands to proteins.
Part II: Cell biology is sometimes cell physics
Abstract: Some behaviors of cells are not due to single proteins or
pathways, but are due to the physical properties of proteomes as a whole.
For example, the growth rates of bacteria as a function of temperature or
salt can be explained the folding stability and diffusion rates of the
proteins in the proteome. Using simple physical models, we explore
physical aspects of cell mechanisms and evolution, also including cellular
energy balance and proteostasis, the machinery that folds and disaggregates
proteins.
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